Miyakogusa Predicted Gene

Lj0g3v0223199.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M124_SOYBN 405 75.0 81.3 (tr|I1M124) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G21770.1 300 57.6 72.5 | Symbols: | Pseudouridine synthase family protein | chr4:11564028-11566345 REVERSE LENGTH=472
Medicago Medtr2g022770.3 392 73.6 80.4 | RNA pseudouridine synthase | HC | chr2:7928768-7924511 | 20130731
Soybean Glyma13g27660.1 405 75.0 81.3  
LJGI gnl|LJGI|BW595398 373 85.5 85.5 similar to UniRef100_A7QUL6 Cluster: Chromosome chr10 scaffold_179, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_179, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0223199.3 length: 289 aa.
IPR020103 Pseudouridine synthase, catalytic domain
method AccNumber shortName E-value location
Biological Process GO:0001522 pseudouridine synthesis    
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0009982 pseudouridine synthase activity    
superfamily SSF55120 Pseudouridine 1.6e-06 197-265
no_ID  
HMMPanther PTHR10436 RNA 6.5e-102 64-265
HMMPanther PTHR10436:SF50 SUBFAMILY 6.5e-102 64-265
Seg seg seg NA 33-43
62-74
Wolf-PSORT
Lj0g3v0223199.3	mito 8, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0223199.3 Not targeted -43.188 -2.989 -5.119 60.61% -35.080