Miyakogusa Predicted Gene

Lj0g3v0221429.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MP69_SOYBN 533 77.4 86.9 (tr|K7MP69) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G23700.1 424 69.0 79.5 | Symbols: | Nucleic acid-binding proteins superfamily | chr3:8531689-8533742 REVERSE LENGTH=392
Medicago Medtr3g084860.1 482 67.7 80.2 | S1 RNA-binding domain protein | HC | chr3:38332018-38337733 | 20130731
Soybean Glyma18g00740.1 532 77.4 86.9  
LJGI gnl|LJGI|TC76137 1259 99.8 99.8 similar to UniRef100_A7Q9K4 Cluster: Chromosome chr5 scaffold_67, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_67, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0221429.1 length: 401 aa.
IPR003029 Ribosomal protein S1, RNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00575 S1 1.8e-16 206-282
ProfileScan PS50126 S1 20.134 119-194
208-282
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 8.9e-28 109-195
199-284
superfamily SSF50249 Nucleic 2.1e-07 205-300
105-195
IPR022967 RNA-binding domain, S1
HMMSmart SM00316 Ribosomal 1.4e-20 117-194
206-282
no_ID  
HMMPanther PTHR10287 S1 6.3e-53 99-399
Seg seg seg NA 10-41
53-66
300-315
Wolf-PSORT
Lj0g3v0221429.1	chlo 7.5, nucl 5, chlo_mito 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0221429.1