Miyakogusa Predicted Gene
- Lj0g3v0221259.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N4V9_SOYBN |
363 |
93.9 |
97.8 |
(tr|K7N4V9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G08450.3 |
306 |
78.9 |
90.0 |
| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). | chr5:2727970-2732572 REVERSE LENGTH=918 |
| Medicago |
Medtr1g077090.2 |
357 |
92.2 |
96.7 |
| histone deacetylation protein Rxt3 | HC | chr1:34396265-34403627 | 20130731 |
| Soybean |
Glyma20g35720.1 |
362 |
93.9 |
97.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0221259.1 |
length: 180 aa. |
| IPR013951 |
Histone deacetylation protein Rxt3 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF08642 |
Rxt3 |
8.1e-13 |
32-80 |
- Wolf-PSORT
Lj0g3v0221259.1 chlo 10, cyto 2, nucl 1, mito 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0221259.1 |
|