| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1MDC9_SOYBN | 1323 | 77.6 | 82.0 | (tr|I1MDC9) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep | AT2G29200.1 | 904 | 56.6 | 66.0 | | Symbols: APUM1, PUM1 | pumilio 1 | chr2:12549483-12553185 REVERSE LENGTH=968 |
| Medicago | Medtr2g097670.2 | 1305 | 75.3 | 80.8 | | pumilio Mpt5 protein, putative | HC | chr2:41717566-41723738 | 20130731 |
| Soybean | Glyma11g14530.1 | 1236 | 72.5 | 78.3 | |
| LJGI | gnl|LJGI|TC62005 | 1402 | 99.6 | 99.6 | homologue to UniRef100_Q2HS37 Cluster: Nucleic acid binding NABP; n=1; Medicago truncatula|Rep: Nucleic acid binding NABP - Medicago truncatula (Barrel medic), partial (32%) |
| Lj0g3v0219909.1 | length: 807 aa. | |||
| IPR001313 | Pumilio RNA-binding repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003723 | RNA binding | ||
| HMMPfam | PF00806 | PUF | 1.4e-06 | 479-509 518-546 552-582 592-620 624-655 663-691 697-722 738-764 |
| HMMSmart | SM00025 | Pumilio-like | 8.7e-07 | 479-514 515-550 551-586 587-622 623-659 660-695 696-727 730-765 |
| ProfileScan | PS50302 | PUM | 4.604 | 479-514 515-550 551-586 587-622 623-659 660-695 724-765 696-718 766-801 |
| ProfileScan | PS50303 | PUM_HD | 124.333 | 459-791 |
| IPR011989 | Armadillo-like helical | |||
| Gene3D | G3DSA:1.25.10.10 | no description | 9.4e-134 | 461-794 |
| IPR012940 | Nucleic acid binding NABP | |||
| HMMPfam | PF07990 | NABP | 5e-85 | 127-299 303-478 |
| IPR016024 | Armadillo-type fold | |||
| Molecular Function | GO:0005488 | binding | ||
| superfamily | SSF48371 | ARM | 7.8e-115 | 459-789 |
| no_ID | ||||
| HMMPanther | PTHR12537 | RNA | 1.4e-271 | 1-803 |
| HMMPanther | PTHR12537:SF12 | PUMILIO | 1.4e-271 | 1-803 |
| Seg | seg | seg | NA | 10-23 413-424 |
Lj0g3v0219909.1 nucl 11, cyto 1, vacu 1, cysk 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0219909.1 |