Miyakogusa Predicted Gene

Lj0g3v0219899.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T361_LOTJA 156 53.2 53.2 (tr|I3T361) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT2G29180.1 55.8 40.8 56.3 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 33 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:12543081-12543702 FORWARD LENGTH=169

Medicago Medtr2g097680.1 67.4 50.0 56.6 | transmembrane protein, putative | HC | chr2:41727711-41724777 | 20130731

Soybean Glyma13g41350.1 69.7 50.0 59.5

LJGI gnl|LJGI|TC63798 430 99.5 99.5 similar to UniRef100_Q2HS36 Cluster: 80C09_19, related; n=1; Medicago truncatula|Rep: 80C09_19, related - Medicago truncatula (Barrel medic), partial (44%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0219899.1 length: 186 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 26-51
67-89
95-110
143-164

Putative transmembrane regions

From To

TM segments
SOSUI 113 135

Wolf-PSORT

Lj0g3v0219899.1 chlo 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0219899.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T361_LOTJA	156	53.2	53.2	(tr\|I3T361) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT2G29180.1	55.8	40.8	56.3	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 33 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). \| chr2:12543081-12543702 FORWARD LENGTH=169
Medicago	Medtr2g097680.1	67.4	50.0	56.6	\| transmembrane protein, putative \| HC \| chr2:41727711-41724777 \| 20130731
Soybean	Glyma13g41350.1	69.7	50.0	59.5
LJGI	gnl\|LJGI\|TC63798	430	99.5	99.5	similar to UniRef100_Q2HS36 Cluster: 80C09_19, related; n=1; Medicago truncatula\|Rep: 80C09_19, related - Medicago truncatula (Barrel medic), partial (44%)

no_ID
Lj0g3v0219899.1				length: 186 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	26-51 67-89 95-110 143-164