Miyakogusa Predicted Gene
- Lj0g3v0218849.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JBM1_SOYBN |
87.4 |
85.1 |
91.5 |
(tr|I1JBM1) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT1G02850.4 |
77.8 |
81.4 |
88.4 |
| Symbols: BGLU11 | beta glucosidase 11 | chr1:630569-633085 FORWARD LENGTH=521 |
| Medicago |
Medtr5g068740.1 |
86.3 |
86.4 |
95.5 |
| glycoside hydrolase family 1 protein | HC | chr5:29121030-29124884 | 20130731 |
| Soybean |
Glyma02g02230.2 |
87.4 |
85.1 |
91.5 |
|
| LJGI |
gnl|LJGI|FS331784 |
462 |
100.0 |
100.0 |
similar to UniRef100_Q8S3J3 Cluster: Hydroxyisourate hydrolase; n=1; Glycine max|Rep: Hydroxyisourate hydrolase - Glycine max (Soybean), partial (31%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0218849.2 |
length: 96 aa. |
| IPR001360 |
Glycoside hydrolase, family 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPanther |
PTHR10353 |
GLYCOSYL |
2.7e-20 |
10-76 |
| HMMPfam |
PF00232 |
Glyco_hydro_1 |
3.9e-14 |
41-78 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
6.1e-16 |
29-81 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
1.1e-15 |
40-76 |
| IPR018120 |
Glycoside hydrolase, family 1, active site |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| PatternScan |
PS00653 |
GLYCOSYL_HYDROL_F1_2 |
NA |
46-60 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
10-29 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
9 |
31 |
- Wolf-PSORT
Lj0g3v0218849.2 plas 4, chlo 3, cyto 3, vacu 2, cyto_nucl 2, golg_plas 2, cysk_plas 2, mito_plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0218849.2 |
|