Miyakogusa Predicted Gene

Lj0g3v0218349.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KQG4_SOYBN 387 76.8 83.3 (tr|I1KQG4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G52450.1 326 66.7 78.5 | Symbols: | MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486
Medicago Medtr6g081410.1 362 71.8 80.2 | MATE efflux family protein | HC | chr6:30489199-30482425 | 20130731
Soybean Glyma08g05510.1 387 76.8 83.3  
LJGI gnl|LJGI|TC69358 222 89.6 89.6 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0218349.1 length: 247 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 3.6e-16 2-89
150-245
HMMTigr TIGR00797 matE: 7.4e-54 1-245
no_ID  
HMMPanther PTHR11206 MULTIDRUG 4.6e-126 1-242
HMMPanther PTHR11206:SF21 MATE 4.6e-126 1-242
Seg seg seg NA 218-237
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 28
37 59
71 93
101 123
145 167
181 203
220 242
Wolf-PSORT
Lj0g3v0218349.1	vacu 8, plas 2, E.R. 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0218349.1