Miyakogusa Predicted Gene

Lj0g3v0217659.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JGL5_SOYBN 229 61.4 66.0 (tr|I1JGL5) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G11550.1 160 48.9 58.6 | Symbols: | Uncharacterised protein family (UPF0497) | chr3:3638262-3639052 FORWARD LENGTH=204
Medicago Medtr1g058560.1 224 60.0 64.6 | casparian strip membrane protein | HC | chr1:25810191-25808737 | 20130731
Soybean Glyma02g36150.1 229 61.4 66.0  
LJGI gnl|LJGI|TC60104 1162 99.7 99.7 weakly similar to UniRef100_A7PP95 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (79%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0217659.1 length: 197 aa.
IPR006459 Uncharacterised protein family UPF0497, trans-membrane plant subgroup
method AccNumber shortName E-value location
HMMTigr TIGR01569 A_tha_TIGR01569: 6.3e-38 40-191
IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
HMMPfam PF04535 DUF588 1.3e-42 33-181
no_ID  
HMMPanther PTHR11615 NITRATE, 4.5e-78 23-193
HMMPanther PTHR11615:SF81 SUBFAMILY 4.5e-78 23-193
Seg seg seg NA 41-55
66-73
128-140
171-187
Putative transmembrane regions
  From To
TM segments
SOSUI		 34 56
85 107
121 143
169 191
Wolf-PSORT
Lj0g3v0217659.1	plas 5.5, cyto_plas 3.5, E.R. 3, chlo 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0217659.1