Miyakogusa Predicted Gene

Lj0g3v0217619.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S749_LOTJA 292 100.0 100.0 (tr|I3S749) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G15220.1 155 71.0 81.3 | Symbols: | Ribosomal protein L27 family protein | chr5:4941466-4942133 REVERSE LENGTH=154
Medicago Medtr3g014010.1 202 91.4 97.1 | 50S ribosomal protein L27 | HC | chr3:3871485-3868099 | 20130731
Soybean Glyma04g16890.2 199 89.5 94.3  
LJGI gnl|LJGI|TC64598 833 100.0 100.0 homologue to UniRef100_A7P912 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0217619.1 length: 140 aa.
IPR001684 Ribosomal protein L27
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
BlastProDom PD003114 Q94AC6_ARATH_Q94AC6; 2e-14 103-140
FPrintScan PR00063 RIBOSOMALL27 2.5e-33 79-103
104-128
129-140
HMMPanther PTHR15893 RIBOSOMAL 7.6e-43 2-140
HMMPfam PF01016 Ribosomal_L27 2.7e-33 77-140
HMMTigr TIGR00062 L27: 4e-30 77-140
superfamily SSF110324 Ribosomal 4.8e-18 95-140
IPR018261 Ribosomal protein L27, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00831 RIBOSOMAL_L27 NA 109-123
no_ID  
Gene3D G3DSA:2.40.50.100 no description 1.2e-23 95-140
Wolf-PSORT
Lj0g3v0217619.1	nucl 9, cyto 2, chlo 1, vacu 1, pero 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0217619.1