Miyakogusa Predicted Gene

Lj0g3v0217609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7IYQ5_MEDTR 1575 66.7 75.2 (tr|G7IYQ5) NBS resistance protein OS=Medicago truncatula GN=MTR_3g014040 PE=4 SV=1
TAIR_pep AT3G14470.1 620 37.6 55.4 | Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054
Medicago Medtr3g014040.1 1575 66.7 75.2 | LRR and NB-ARC domain disease resistance protein | HC | chr3:3884543-3888294 | 20130731
Soybean Glyma13g04230.1 863 43.4 58.7  
LJGI gnl|LJGI|TC80690 333 89.3 89.3 weakly similar to UniRef100_A7Q1X9 Cluster: Chromosome chr13 scaffold_45, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_45, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0217609.1 length: 1240 aa.
IPR000767 Disease resistance protein
method AccNumber shortName E-value location
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 3.4e-19 200-215
273-287
371-385
605-621
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.74 632-654
ProfileScan PS51450 LRR 5.001 585-608
609-630
656-677
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 6.1e-79 196-460
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 38 607-630
654-677
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 3.8e-07 585-625
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6e-41 155-407
no_ID  
Coil coil coiled-coil NA 41-62
Gene3D G3DSA:3.40.50.300 no description 2.9e-13 187-325
Gene3D G3DSA:3.80.10.10 no description 1.1e-18 572-684
934-1094
HMMPanther PTHR23155 LEUCINE-RICH 5.8e-185 40-1240
HMMPanther PTHR23155:SF138OS03G0848700 PROTEIN 5.8e-185 40-1240
Seg seg seg NA 38-51
191-211
372-385
834-845
1027-1038
1151-1162
1191-1209
superfamily SSF52058 L 1.2e-19 491-889
935-1215
Wolf-PSORT
Lj0g3v0217609.1	nucl 5, cyto 4, plas 2, cysk 2, cyto_pero 2, cysk_plas 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0217609.1