Miyakogusa Predicted Gene

Lj0g3v0217509.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1J919_SOYBN 277 67.1 75.6 (tr|I1J919) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G37210.1 103 59.0 75.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17512376-17514421 FORWARD LENGTH=492
Medicago Medtr5g018600.1 271 65.1 74.1 | TPR domain protein | HC | chr5:6944048-6947851 | 20130731
Soybean Glyma01g38800.1 277 67.1 75.6  
LJGI gnl|LJGI|TC72125 1037 100.0 100.0 weakly similar to UniRef100_UPI000034F193 Cluster: tetratricopeptide repeat (TPR)-containing protein; n=1; Arabidopsis thaliana|Rep: tetratricopeptide repeat (TPR)-containing protein - Arabidopsis thaliana, partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0217509.1 length: 212 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.8e-07 141-202
IPR019544 Tetratricopeptide, SHNi-TPR domain
HMMPfam PF10516 SHNi-TPR 1.4e-09 168-204
no_ID  
Coil coil coiled-coil NA 173-201
HMMPanther PTHR15081 NUCLEAR 9.4e-56 1-212
HMMPanther PTHR15081:SF1 HISTONE 9.4e-56 1-212
Seg seg seg NA 85-100
122-144
superfamily SSF48452 TPR-like 1.6e-07 1-198
Wolf-PSORT
Lj0g3v0217509.1	mito 5, chlo 4, nucl 4, nucl_plas 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0217509.1