Miyakogusa Predicted Gene

Lj0g3v0217409.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MEE7_SOYBN 1090 67.5 75.0 (tr|K7MEE7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G77320.1 603 44.6 59.9 | Symbols: MEI1 | transcription coactivators | chr1:29056740-29062710 FORWARD LENGTH=972
Medicago Medtr1g029630.2 942 70.6 79.7 | DNA topoisomerase 2-binding-like protein | HC | chr1:10213449-10202528 | 20130731
Soybean Glyma16g00740.1 939 67.8 76.5  
LJGI gnl|LJGI|BW597541 492 100.0 100.0 similar to UniRef100_Q70X85 Cluster: MEI1 protein; n=1; Arabidopsis thaliana|Rep: MEI1 protein - Arabidopsis thaliana (Mouse-ear cress), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0217409.2 length: 773 aa.
IPR001357 BRCT domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.10190 no description 5.1e-24 2-69
170-252
364-452
463-554
HMMPfam PF00533 BRCT 4.7e-07 168-244
HMMPfam PF12738 PTCB-BRCT 4.1e-20 2-49
467-528
HMMSmart SM00292 breast 1.4e-10 1-57
168-248
364-440
460-536
ProfileScan PS50172 BRCT 15.983 1-67
166-258
362-450
463-546
superfamily SSF52113 BRCT 1.8e-13 458-546
1-73
362-454
173-249
no_ID  
HMMPanther PTHR13561 DNA 6.8e-86 1-671
HMMPanther PTHR13561:SF8 SUBFAMILY 6.8e-86 1-671
Seg seg seg NA 311-318
Wolf-PSORT
Lj0g3v0217409.2	nucl 10, chlo 1, cyto 1, vacu 1, pero 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0217409.2