Miyakogusa Predicted Gene

Lj0g3v0216769.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S6L3_LOTJA 473 98.7 98.7 (tr|I3S6L3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G17510.1 352 71.1 86.4 | Symbols: UCH3 | ubiquitin C-terminal hydrolase 3 | chr4:9767114-9768648 REVERSE LENGTH=234
Medicago Medtr4g100360.1 418 85.0 94.8 | ubiquitin carboxyl-terminal hydrolase family protein | HC | chr4:41362487-41368004 | 20130731
Soybean Glyma05g05190.1 419 88.1 94.2  
LJGI gnl|LJGI|TC58963 1366 99.9 99.9 similar to UniRef100_A7R2N8 Cluster: Chromosome undetermined scaffold_437, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_437, whole genome shotgun sequence - Vitis vinifera (Grape), partial (94%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0216769.1 length: 231 aa.
IPR001578 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
FPrintScan PR00707 UBCTHYDRLASE 3.5e-29 12-29
50-62
90-107
162-173
178-188
Gene3D G3DSA:3.40.532.10 no description 2.9e-76 7-227
HMMPanther PTHR10589 UBIQUITIN 2.3e-106 4-228
HMMPfam PF01088 Peptidase_C12 3e-66 9-213
no_ID  
HMMPanther PTHR10589:SF17 UBIQUITIN 2.3e-106 4-228
superfamily SSF54001 Cysteine 1.5e-77 8-229
Wolf-PSORT
Lj0g3v0216769.1	nucl 6.5, chlo 5, nucl_plas 4, cyto 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0216769.1