Miyakogusa Predicted Gene

Lj0g3v0216229.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LJF5_SOYBN 378 98.9 100.0 (tr|K7LJF5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G10630.1 371 98.3 99.4 | Symbols: ATARFA1F, ARFA1F | ADP-ribosylation factor A1F | chr1:3513189-3514230 REVERSE LENGTH=181
Medicago Medtr5g034130.4 375 100.0 100.0 | ADP-ribosylation factor-like protein A1D | HC | chr5:14765253-14768983 | 20130731
Soybean Glyma18g19420.2 375 100.0 100.0  
LJGI gnl|LJGI|TC57225 1082 100.0 100.0 UniRef100_Q38JU3 Cluster: ADP ribosylation factor 002; n=2; core eudicotyledons|Rep: ADP ribosylation factor 002 - Daucus carota (Carrot), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0216229.1 length: 181 aa.
IPR003579 Small GTPase superfamily, Rab type
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 0.0041 18-180
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 2e-23 16-157
IPR006687 Small GTPase superfamily, SAR1-type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006886 intracellular protein transport    
HMMSmart SM00178 Sar1p-like 1.6e-25 1-177
IPR006689 Small GTPase superfamily, ARF/SAR type
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00328 SAR1GTPBP 1.3e-19 19-42
47-71
74-99
119-140
HMMPfam PF00025 Arf 2.8e-80 5-177
IPR024156 Small GTPase superfamily, ARF type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00177 ARF-like 3.3e-136 1-181
ProfileScan PS51417 ARF 25.659 11-177
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.5e-55 13-180
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.1e-74 16-180
HMMPanther PTHR11711 ADP 2.5e-125 1-180
Wolf-PSORT
Lj0g3v0216229.1	mito 7, chlo 2, cyto 2, nucl 1, plas 1, golg 1, nucl_plas 1, golg_plas 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0216229.1