Miyakogusa Predicted Gene

Lj0g3v0215599.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T3G0_LOTJA 534 95.9 98.2 (tr|I3T3G0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G40670.1 383 67.9 82.1 | Symbols: | PQ-loop repeat family protein / transmembrane family protein | chr5:16285968-16287591 FORWARD LENGTH=270
Medicago Medtr0018s0310.1 470 82.2 92.2 | lysosomal cystine transporter family protein | HC | scaffold0018:182962-186863 | 20130731
Soybean Glyma19g23610.1 441 80.3 89.6  
LJGI gnl|LJGI|TC64287 1366 96.1 96.1 similar to UniRef100_A7PLW5 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (83%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0215599.1 length: 271 aa.
IPR005282 Lysosomal cystine transporter
method AccNumber shortName E-value location
HMMPanther PTHR13131 CYSTINOSIN 4.1e-119 5-270
HMMTigr TIGR00951 2A43: 2.9e-67 13-244
IPR006603 Cystinosin/ERS1p repeat
HMMSmart SM00679 Repeated 4.9e-08 27-58
166-197
no_ID  
HMMPanther PTHR13131:SF5 SUBFAMILY 4.1e-119 5-270
HMMPfam PF04193 PQ-loop 4.9e-13 15-71
154-207
Putative transmembrane regions
  From To
TM segments
SOSUI		 12 34
89 111
123 144
148 170
222 244
Wolf-PSORT
Lj0g3v0215599.1	nucl 4, chlo 2, plas 2, cyto 1, extr 1, vacu 1, pero 1, cysk 1, golg 1, chlo_mito 1, cyto_pero 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0215599.1