Miyakogusa Predicted Gene

Lj0g3v0214779.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IM44_MEDTR 932 69.2 78.2 (tr|G7IM44) TIR-NBS-LRR type disease resistance protein OS=Medicago truncatula GN=MTR_2g083520 PE=4 SV=1
TAIR_pep AT5G17680.1 413 37.4 56.8 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr2g083520.2 933 69.2 78.2 | disease resistance protein (TIR-NBS-LRR class), putative | LC | chr2:35058143-35050214 | 20130731
Soybean Glyma12g34020.1 827 65.9 77.6  
LJGI gnl|LJGI|FS343073 1292 99.7 99.7 weakly similar to UniRef100_A7QHI1 Cluster: Chromosome chr5 scaffold_98, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_98, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0214779.1 length: 665 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 1.4e-35 54-186
HMMSmart SM00255 Toll 1.7e-46 51-191
ProfileScan PS50104 TIR 31.637 50-191
superfamily SSF52200 Toll/Interleukin 1.6e-42 40-194
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 1.5e-17 252-267
328-342
421-435
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 3e-40 242-488
IPR011713 Leucine-rich repeat 3
HMMPfam PF07725 LRR_3 9e-07 641-657
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.5e-26 210-458
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 9.5e-25 48-178
Gene3D G3DSA:3.40.50.300 no description 4e-09 248-373
HMMPanther PTHR11017 LEUCINE-RICH 1.1e-171 36-661
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1.1e-171 36-661
Seg seg seg NA 34-41
204-215
332-348
superfamily SSF46785 "Winged 3.3e-16 456-562
superfamily SSF52058 L 4.5e-07 536-657
Wolf-PSORT
Lj0g3v0214779.1	chlo 7, mito 5.5, cyto_mito 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0214779.1