Miyakogusa Predicted Gene

Lj0g3v0214359.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K4M3_SOYBN 726 78.5 85.3 (tr|K7K4M3) DNA polymerase OS=Glycine max PE=3 SV=1
TAIR_pep AT5G67100.1 600 67.8 79.5 | Symbols: ICU2 | DNA-directed DNA polymerases | chr5:26776994-26785104 FORWARD LENGTH=1524
Medicago Medtr5g017070.1 780 84.2 89.0 | DNA polymerase | HC | chr5:6204095-6191331 | 20130731
Soybean Glyma01g39430.1 726 78.5 85.3  
LJGI gnl|LJGI|BP076374 123 91.4 91.4 similar to UniRef100_A7PLB6 Cluster: DNA polymerase; n=1; Vitis vinifera|Rep: DNA polymerase - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0214359.1 length: 447 aa.
IPR004578 DNA-directed DNA polymerase, family B, pol2
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006260 DNA replication    
HMMTigr TIGR00592 pol2: 2.5e-114 1-445
IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006260 DNA replication    
HMMPfam PF03104 DNA_pol_B_exo1 1.6e-15 2-196
IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006260 DNA replication    
HMMPfam PF00136 DNA_pol_B 4.5e-37 270-445
IPR006172 DNA-directed DNA polymerase, family B
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006139 nucleobase-containing compound metabolic process    
HMMSmart SM00486 DNA 3.8e-74 2-447
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 3e-51 1-285
IPR023211 DNA polymerase, palm domain
Gene3D G3DSA:3.90.1600.10 no description 8.7e-07 331-381
no_ID  
Gene3D G3DSA:1.10.287.690 no description 2.4e-10 402-445
Gene3D G3DSA:3.30.420.10 no description 2.5e-39 82-267
HMMPanther PTHR10322 DNA 9.5e-190 1-445
HMMPanther PTHR10322:SF3 DNA 9.5e-190 1-445
Seg seg seg NA 312-325
336-343
superfamily SSF56672 DNA/RNA 3.8e-39 269-445
Wolf-PSORT
Lj0g3v0214359.1	cyto 6, nucl 3, cyto_E.R. 3, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0214359.1