Miyakogusa Predicted Gene

Lj0g3v0213949.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S968_LOTJA 219 98.1 100.0 (tr|I3S968) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT2G29540.2 135 62.4 81.7 | Symbols: ATRPC14, ATRPAC14, RPC14 | RNApolymerase 14 kDa subunit | chr2:12642727-12643828 FORWARD LENGTH=122
Medicago Medtr7g020830.1 173 79.4 89.7 | DNA-directed RNA polymerase | HC | chr7:6496753-6500520 | 20130731
Soybean Glyma18g51640.1 183 76.6 92.5  
LJGI gnl|LJGI|TC65848 609 99.4 99.4 similar to UniRef100_A7NYN7 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0213949.1 length: 104 aa.
IPR008193 DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
PatternScan PS01154 RNA_POL_L_13KD NA 16-47
IPR009025 DNA-directed RNA polymerase, RBP11-like
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
superfamily SSF55257 RBP11-like 8.2e-26 6-96
no_ID  
Gene3D G3DSA:3.30.1360.10 no description 6.3e-32 7-99
HMMPanther PTHR13946 DNA-DIRECTED 8.1e-42 8-104
HMMPanther PTHR13946:SF17 DNA-DIRECTED 8.1e-42 8-104
HMMPfam PF13656 RNA_pol_L_2 1.2e-27 11-85
Wolf-PSORT
Lj0g3v0213949.1	chlo 7, nucl 4, mito 2, cyto_nucl 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0213949.1