Miyakogusa Predicted Gene
- Lj0g3v0212839.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MHL7_SOYBN |
336 |
86.3 |
92.3 |
(tr|I1MHL7) Pectinesterase OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT3G43270.1 |
298 |
75.4 |
86.6 |
| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr3:15222402-15225124 REVERSE LENGTH=527 |
| Medicago |
Medtr2g044880.1 |
335 |
85.6 |
92.8 |
| pectinesterase/pectinesterase inhibitor | HC | chr2:19514677-19509054 | 20130731 |
| Soybean |
Glyma15g20550.1 |
336 |
86.3 |
92.3 |
|
| LJGI |
gnl|LJGI|TC60009 |
77.8 |
89.6 |
89.6 |
similar to UniRef100_Q43062 Cluster: Pectinesterase PPE8B precursor; n=1; Prunus persica|Rep: Pectinesterase PPE8B precursor - Prunus persica (Peach), partial (73%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0212839.1 |
length: 181 aa. |
| IPR000070 |
Pectinesterase, catalytic |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005618 |
cell wall |
|
|
| Molecular Function |
GO:0030599 |
pectinesterase activity |
|
|
| Biological Process |
GO:0042545 |
cell wall modification |
|
|
| HMMPfam |
PF01095 |
Pectinesterase |
3.4e-76 |
2-165 |
| IPR011050 |
Pectin lyase fold/virulence factor |
| superfamily |
SSF51126 |
Pectin |
1.4e-55 |
2-179 |
| IPR012334 |
Pectin lyase fold |
| Gene3D |
G3DSA:2.160.20.10 |
no description |
7.8e-62 |
2-177 |
| IPR018040 |
Pectinesterase, active site |
| PatternScan |
PS00503 |
PECTINESTERASE_2 |
NA |
10-19 |
| no_ID |
|
| HMMPanther |
PTHR31707 |
FAMILY |
3.1e-113 |
1-181 |
| HMMPanther |
PTHR31707:SF0 |
SUBFAMILY |
3.1e-113 |
1-181 |
- Wolf-PSORT
Lj0g3v0212839.1 nucl 4.5, chlo 4, cyto_nucl 4, cyto 2.5, chlo_mito 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0212839.1 |
|