Miyakogusa Predicted Gene

Lj0g3v0212469.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1K1S1_SOYBN 597 79.2 86.7 (tr|I1K1S1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G15790.1 529 70.8 79.7 | Symbols: SQN, CYP40 | peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase | chr2:6878144-6880743 REVERSE LENGTH=361
Medicago Medtr8g079690.1 565 75.2 84.1 | peptidyl-prolyl cis-trans isomerase D | HC | chr8:34166486-34170994 | 20130731
Soybean Glyma17g20430.1 599 80.0 86.7  
LJGI gnl|LJGI|BW597367 890 100.0 100.0 similar to UniRef100_Q9C566 Cluster: Peptidyl-prolyl cis-trans isomerase CYP40; n=2; Arabidopsis thaliana|Rep: Peptidyl-prolyl cis-trans isomerase CYP40 - Arabidopsis thaliana (Mouse-ear cress), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0212469.1 length: 360 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 6.4e-10 297-330
IPR002130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain
Molecular Function GO:0003755 peptidyl-prolyl cis-trans isomerase activity    
Biological Process GO:0006457 protein folding    
FPrintScan PR00153 CSAPPISMRASE 1.6e-37 24-39
61-73
104-119
119-131
132-147
HMMPfam PF00160 Pro_isomerase 6.3e-49 7-172
ProfileScan PS50072 CSA_PPIASE_2 45.782 7-172
superfamily SSF50891 Cyclophilin-like 3.2e-74 1-174
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.2e-25 212-351
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 14.414 212-245
297-330
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 7.5e-09 212-245
297-330
ProfileScan PS50005 TPR 14.337 212-245
297-330
no_ID  
Gene3D G3DSA:2.40.100.10 no description 2.9e-79 1-172
HMMPanther PTHR11071 PEPTIDYL-PROLYL 4.7e-218 1-359
HMMPanther PTHR11071:SF110PEPTIDYL-PROLYL CIS-TRANS 4.7e-218 1-359
Seg seg seg NA 72-83
338-349
superfamily SSF48452 TPR-like 1.5e-22 212-359
Wolf-PSORT
Lj0g3v0212469.1	cyto 9, cysk 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0212469.1