Miyakogusa Predicted Gene
- Lj0g3v0212329.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MQD2_SOYBN |
1303 |
80.4 |
89.0 |
(tr|K7MQD2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G07380.1 |
1138 |
73.6 |
85.0 |
| Symbols: | Neutral/alkaline non-lysosomal ceramidase | chr1:2264829-2268306 REVERSE LENGTH=779 |
| Medicago |
Medtr3g061720.5 |
1291 |
80.2 |
88.6 |
| neutral/alkaline non-lysosomal ceramidase | HC | chr3:24621572-24627200 | 20130731 |
| Soybean |
Glyma18g07680.1 |
1296 |
80.1 |
88.7 |
|
| LJGI |
gnl|LJGI|TC58926 |
1308 |
99.7 |
99.7 |
similar to UniRef100_A9YFM2 Cluster: Neutral ceramidase; n=1; Triticum aestivum|Rep: Neutral ceramidase - Triticum aestivum (Wheat), partial (25%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0212329.1 |
length: 778 aa. |
| IPR006823 |
Neutral/alkaline nonlysosomal ceramidase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR12670 |
CERAMIDASE |
0 |
21-778 |
| HMMPfam |
PF04734 |
Ceramidase_alk |
1.5e-297 |
41-777 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
25-30 |
- Wolf-PSORT
Lj0g3v0212329.1 chlo 4, cyto 3.5, cyto_nucl 2.5, chlo_mito 2.5, plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0212329.1 |
|