Miyakogusa Predicted Gene
- Lj0g3v0212249.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LFA3_SOYBN |
155 |
61.9 |
75.4 |
(tr|K7LFA3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G20480.1 |
92.0 |
36.6 |
56.9 |
| Symbols: EFR | EF-TU receptor | chr5:6922497-6925679 FORWARD LENGTH=1031 |
| Medicago |
Medtr5g044680.1 |
150 |
60.6 |
72.4 |
| LRR receptor-like kinase family protein | LC | chr5:19608408-19604867 | 20130731 |
| Soybean |
Glyma09g35010.1 |
156 |
61.9 |
75.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0212249.1 |
length: 145 aa. |
| IPR001611 |
Leucine-rich repeat |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00560 |
LRR_1 |
0.67 |
105-122 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
2.3e-26 |
4-123 |
| HMMPanther |
PTHR24420 |
FAMILY |
5.3e-35 |
2-124 |
| HMMPanther |
PTHR24420:SF44 |
SUBFAMILY |
5.3e-35 |
2-124 |
| Seg |
seg |
seg |
NA |
132-144 |
| superfamily |
SSF52058 |
L |
3.4e-23 |
2-123 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
43 |
65 |
| 122 |
144 |
- Wolf-PSORT
Lj0g3v0212249.1 nucl 9, mito 2, extr 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0212249.1 |
|