Miyakogusa Predicted Gene

Lj0g3v0211739.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KY04_SOYBN 1157 72.1 79.6 (tr|K7KY04) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G44180.2 820 54.3 66.7 | Symbols: | Homeodomain-like transcriptional regulator | chr5:17783172-17789872 FORWARD LENGTH=1507
Medicago Medtr4g078860.2 1125 70.4 78.7 | homeodomain transcriptional regulator | HC | chr4:30499257-30483381 | 20130731
Soybean Glyma06g44290.1 1087 69.7 76.2  
LJGI gnl|LJGI|BP036297 898 100.0 100.0 similar to UniRef100_A7PJ94 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0211739.1 length: 817 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 7.9e-14 21-75
HMMSmart SM00389 Homeodomain 1.9e-14 18-80
ProfileScan PS50071 HOMEOBOX_2 15.969 16-76
IPR004022 DDT domain
HMMPfam PF02791 DDT 8.6e-26 552-610
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2e-15 4-75
superfamily SSF46689 Homeodomain-like 4.2e-15 5-75
IPR018500 DDT domain, subgroup
HMMSmart SM00571 domain 1.1e-21 551-610
IPR018501 DDT domain superfamily
ProfileScan PS50827 DDT 16.662 551-610
no_ID  
Coil coil coiled-coil NA 369-472
HMMPanther PTHR24326 FAMILY 1.1e-24 16-528
HMMPanther PTHR24326:SF78 SUBFAMILY 1.1e-24 16-528
Seg seg seg NA 410-448
Putative transmembrane regions
  From To
TM segments
SOSUI		 554 576
Wolf-PSORT
Lj0g3v0211739.1	cyto 7, nucl 3, E.R. 2, chlo 1, vacu 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0211739.1