Miyakogusa Predicted Gene
- Lj0g3v0211639.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KFL1_SOYBN |
120 |
73.2 |
75.6 |
(tr|I1KFL1) Uncharacterized protein OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT2G34660.2 |
113 |
67.1 |
74.4 |
| Symbols: MRP2, ABCC2, AtABCC2 | multidrug resistance-associated protein 2 | chr2:14603267-14612387 FORWARD LENGTH=1623 |
| Medicago |
Medtr3g011820.1 |
119 |
72.0 |
74.4 |
| multidrug resistance protein ABC transporter family protein | HC | chr3:3016723-3005103 | 20130731 |
| Soybean |
Glyma06g46940.1 |
120 |
73.2 |
75.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0211639.1 |
length: 85 aa. |
| IPR003439 |
ABC transporter-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Molecular Function |
GO:0016887 |
ATPase activity |
|
|
| HMMPfam |
PF00005 |
ABC_tran |
3e-09 |
5-37 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
9e-23 |
1-85 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
7.2e-29 |
2-83 |
| HMMPanther |
PTHR24223 |
FAMILY |
3.6e-58 |
2-83 |
| HMMPanther |
PTHR24223:SF110PREDICTED: |
SIMILAR |
3.6e-58 |
2-83 |
| Seg |
seg |
seg |
NA |
13-32 |
- Wolf-PSORT
Lj0g3v0211639.1 cyto 6, chlo 5, nucl 1, vacu 1, cysk 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0211639.1 |
|