Miyakogusa Predicted Gene

Lj0g3v0211629.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KFL1_SOYBN 755 71.7 79.5 (tr|I1KFL1) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT1G30410.1 591 69.8 80.7 | Symbols: ATMRP13, MRP13, ABCC12 | multidrug resistance-associated protein 13 | chr1:10739357-10747017 FORWARD LENGTH=1468
Medicago Medtr3g011820.1 745 84.6 90.8 | multidrug resistance protein ABC transporter family protein | HC | chr3:3016723-3005103 | 20130731
Soybean Glyma06g46940.1 755 71.7 79.5  
LJGI gnl|LJGI|DC595106 357 97.5 97.5 similar to UniRef100_A7Q1C1 Cluster: Chromosome chr10 scaffold_43, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_43, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0211629.1 length: 598 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 1.2e-06 423-538
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 7.7e-13 122-232
ProfileScan PS50893 ABC_TRANSPORTER_2 22.549 79-303
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 3.7e-05 106-302
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 1e-06 418-575
3-75
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 205-219
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 12.365 417-556
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.4e-46 79-289
no_ID  
Coil coil coiled-coil NA 49-70
Gene3D G3DSA:1.20.1560.10 no description 1.4e-22 4-63
419-571
Gene3D G3DSA:3.40.50.300 no description 1.1e-60 79-316
HMMPanther PTHR24223 FAMILY 0 1-597
HMMPanther PTHR24223:SF110PREDICTED: SIMILAR 0 1-597
Wolf-PSORT
Lj0g3v0211629.1	vacu 5, extr 3, E.R._vacu 3, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0211629.1