Miyakogusa Predicted Gene

Lj0g3v0211059.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L1I2_SOYBN 430 51.4 69.5 (tr|I1L1I2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G12775.1 268 32.1 52.9 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:4353906-4355840 FORWARD LENGTH=644
Medicago Medtr6g079590.1 413 48.4 67.3 | pentatricopeptide (PPR) repeat protein | LC | chr6:30027878-30029913 | 20130731
Soybean Glyma09g07250.1 425 52.1 70.3  
LJGI gnl|LJGI|TC77080 1707 99.7 99.7 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14 scaffold_190, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_190, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0211059.1 length: 456 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 6.5e-07 256-287
292-316
HMMPfam PF13041 PPR_2 2.4e-16 88-130
190-237
329-376
HMMTigr TIGR00756 PPR: 6.8e-09 86-118
193-226
227-261
263-296
298-331
332-366
ProfileScan PS51375 PPR 7.969 48-82
83-117
118-152
190-224
157-187
225-259
260-294
295-329
330-364
365-399
no_ID  
HMMPanther PTHR24015 FAMILY 1.2e-92 33-397
HMMPanther PTHR24015:SF0 SUBFAMILY 1.2e-92 33-397
Wolf-PSORT
Lj0g3v0211059.1	mito 7.5, chlo 5, cyto_mito 4.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0211059.1