Miyakogusa Predicted Gene

Lj0g3v0210949.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KCE6_SOYBN 881 78.2 83.4 (tr|K7KCE6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G33390.1 619 59.9 70.2 | Symbols: ATFAS4, FAS4 | RNA helicase family protein | chr1:12099738-12104108 REVERSE LENGTH=1237
Medicago Medtr4g023590.1 869 77.0 83.9 | ATP-dependent RNA helicase DHX37-like protein, putative | HC | chr4:7996592-7989993 | 20130731
Soybean Glyma03g02730.1 879 78.2 83.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0210949.1 length: 579 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 5.7e-12 426-512
HMMSmart SM00490 helicase 4.3e-15 410-512
ProfileScan PS51194 HELICASE_CTER 14.209 371-553
IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
PatternScan PS00690 DEAH_ATP_HELICASE NA 118-127
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 0.0018 12-174
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 1.8e-09 4-185
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 3.2e-23 4-211
ProfileScan PS51192 HELICASE_ATP_BIND_1 19.990 7-199
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6.5e-67 6-554
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.6e-13 3-183
421-522
HMMPanther PTHR18934 ATP-DEPENDENT 1.1e-211 1-558
HMMPanther PTHR18934:SF68 SUBFAMILY 1.1e-211 1-558
Seg seg seg NA 334-351
497-512
Wolf-PSORT
Lj0g3v0210949.1	nucl 8, cyto 2, cysk 2, chlo 1, plas 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0210949.1