- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JLW4_SOYBN |
200 |
79.0 |
84.0 |
(tr|I1JLW4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G54020.1 |
183 |
72.3 |
80.7 |
| Symbols: AtIPCS1 | Arabidopsis Inositol phosphorylceramide synthase 1 | chr3:20006098-20008020 FORWARD LENGTH=305 |
| Medicago |
Medtr4g020040.2 |
206 |
81.7 |
85.0 |
| plant inositol phosphorylceramide synthase | HC | chr4:6413135-6418660 | 20130731 |
| Soybean |
Glyma03g15850.1 |
200 |
79.0 |
84.0 |
|
| LJGI |
gnl|LJGI|TC62712 |
571 |
99.3 |
99.3 |
similar to UniRef100_A7PNX4 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0209219.1 |
length: 120 aa. |
| IPR025749 |
Sphingomyelin synthase-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14360 |
PAP2_C |
2.7e-23 |
45-113 |
| no_ID |
|
| HMMPanther |
PTHR21290 |
SPHINGOMYELIN |
8.2e-77 |
1-119 |
| HMMPanther |
PTHR21290:SF1 |
SPINGOMYELIN |
8.2e-77 |
1-119 |
| Seg |
seg |
seg |
NA |
80-94 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
41 |
62 |
| 85 |
107 |
- Wolf-PSORT
Lj0g3v0209219.1 cyto 6, golg 4, chlo 1, extr 1, vacu 1, E.R. 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0209219.1 |
|