Miyakogusa Predicted Gene
- Lj0g3v0208589.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S2G5_LOTJA |
493 |
90.0 |
90.3 |
(tr|I3S2G5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G25720.1 |
327 |
68.6 |
82.7 |
| Symbols: ATQC, QC, QCT | glutaminyl cyclase | chr4:13099929-13102470 REVERSE LENGTH=320 |
| Medicago |
Medtr0057s0080.1 |
386 |
65.6 |
75.2 |
| glutamine cyclotransferase | HC | scaffold0057:23516-34321 | 20130731 |
| Soybean |
Glyma16g29760.1 |
397 |
69.3 |
77.7 |
|
| LJGI |
gnl|LJGI|TC63096 |
1703 |
99.8 |
99.8 |
weakly similar to UniRef100_A7QG72 Cluster: Chromosome undetermined scaffold_91, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_91, whole genome shotgun sequence - Vitis vinifera (Grape), partial (75%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0208589.1 |
length: 289 aa. |
| IPR007788 |
Glutamine cyclotransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05096 |
Glu_cyclase_2 |
1.4e-66 |
65-289 |
| IPR015943 |
WD40/YVTN repeat-like-containing domain |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Gene3D |
G3DSA:2.130.10.10 |
no description |
0.00093 |
103-285 |
| no_ID |
|
| HMMPanther |
PTHR31270 |
FAMILY |
3.6e-84 |
70-289 |
| HMMPanther |
PTHR31270:SF0 |
SUBFAMILY |
3.6e-84 |
70-289 |
| Seg |
seg |
seg |
NA |
38-61 |
| superfamily |
SSF63825 |
YWTD |
1.9e-10 |
99-285 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
33 |
55 |
- Wolf-PSORT
Lj0g3v0208589.1 nucl 4, plas 3, E.R. 2, golg 2, cyto_nucl 2, cysk_nucl 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0208589.1 |
|