Miyakogusa Predicted Gene

Lj0g3v0206979.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L9X2_MEDTR 179 89.4 93.6 (tr|G7L9X2) DNA-directed RNA polymerase OS=Medicago truncatula GN=MTR_8g023480 PE=3 SV=1
TAIR_pep AT5G45140.1 173 83.0 91.5 | Symbols: NRPC2 | nuclear RNA polymerase C2 | chr5:18247416-18257713 REVERSE LENGTH=1161
Medicago Medtr8g023445.1 180 89.4 93.6 | DNA-directed RNA polymerase | LC | chr8:8458667-8488921 | 20130731
Soybean Glyma01g00980.1 178 87.2 93.6  
LJGI gnl|LJGI|TC67559 567 100.0 100.0 similar to UniRef100_A7QMF0 Cluster: DNA-directed RNA polymerase; n=4; core eudicotyledons|Rep: DNA-directed RNA polymerase - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0206979.1 length: 136 aa.
IPR007641 RNA polymerase Rpb2, domain 7
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPfam PF04560 RNA_pol_Rpb2_7 1.2e-29 43-133
IPR015712 DNA-directed RNA polymerase, subunit 2
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
Molecular Function GO:0032549 ribonucleoside binding    
HMMPanther PTHR20856 DNA-DIRECTED 6.3e-58 43-135
no_ID  
HMMPanther PTHR20856:SF8 DNA-DIRECTED 6.3e-58 43-135
superfamily SSF64484 beta 7.2e-36 43-135
Wolf-PSORT
Lj0g3v0206979.1	chlo 8.5, chlo_mito 5.5, extr 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0206979.1