Miyakogusa Predicted Gene

Lj0g3v0206369.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L482_SOYBN 603 79.3 86.0 (tr|I1L482) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G52450.1 502 66.3 80.3 | Symbols: | MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486
Medicago Medtr6g081410.1 597 77.8 85.8 | MATE efflux family protein | HC | chr6:30489199-30482425 | 20130731
Soybean Glyma09g31030.1 603 79.3 86.0  
LJGI gnl|LJGI|GO036543 801 98.6 98.6 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0206369.2 length: 372 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 1.6e-34 1-113
174-335
HMMTigr TIGR00797 matE: 8e-87 1-350
no_ID  
HMMPanther PTHR11206 MULTIDRUG 1.1e-208 1-372
HMMPanther PTHR11206:SF21 MATE 1.1e-208 1-372
Seg seg seg NA 241-261
Putative transmembrane regions
  From To
TM segments
SOSUI		 30 52
61 83
98 120
125 147
169 191
205 227
247 269
279 301
318 340
348 370
Wolf-PSORT
Lj0g3v0206369.2	plas 6.5, cyto_plas 4, E.R. 3, vacu 2, golg 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0206369.2