Miyakogusa Predicted Gene

Lj0g3v0206369.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L482_SOYBN 765 76.5 84.5 (tr|I1L482) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G52450.1 624 67.3 81.4 | Symbols: | MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486
Medicago Medtr6g081410.1 750 76.3 86.4 | MATE efflux family protein | HC | chr6:30489199-30482425 | 20130731
Soybean Glyma09g31030.1 765 76.5 84.5  
LJGI gnl|LJGI|TC69358 1124 100.0 100.0 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0206369.1 length: 496 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 3.1e-34 54-214
275-436
HMMTigr TIGR00797 matE: 4.7e-98 54-451
no_ID  
HMMPanther PTHR11206 MULTIDRUG 9.4e-254 33-495
HMMPanther PTHR11206:SF21 MATE 9.4e-254 33-495
Seg seg seg NA 342-362
Putative transmembrane regions
  From To
TM segments
SOSUI		 51 73
82 104
131 153
162 184
199 221
226 248
270 292
306 328
348 370
380 402
419 441
450 472
Wolf-PSORT
Lj0g3v0206369.1	plas 6, vacu 4, E.R._plas 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0206369.1