Miyakogusa Predicted Gene

Lj0g3v0205889.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T7U7_LOTJA 507 99.6 99.6 (tr|I3T7U7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G17170.1 265 68.2 87.9 | Symbols: RFC3 | Translation elongation factor EF1B/ribosomal protein S6 family protein | chr3:5853186-5854853 REVERSE LENGTH=314
Medicago Medtr2g033490.1 337 69.9 81.9 | 30S ribosomal protein S6 | HC | chr2:12747919-12750882 | 20130731
Soybean Glyma09g03770.1 379 71.4 84.9  
LJGI gnl|LJGI|TC71069 1600 100.0 100.0 similar to UniRef100_A2Q664 Cluster: Ribosomal protein S6; n=1; Medicago truncatula|Rep: Ribosomal protein S6 - Medicago truncatula (Barrel medic), partial (67%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0205889.1 length: 269 aa.
IPR000529 Ribosomal protein S6
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Molecular Function GO:0019843 rRNA binding    
HMMPfam PF01250 Ribosomal_S6 1.4e-26 135-224
HMMTigr TIGR00166 S6: 5.1e-27 135-226
superfamily SSF54995 Ribosomal 1.2e-29 133-237
IPR014717 Translation elongation factor EF1B/ribosomal protein S6
Gene3D G3DSA:3.30.70.60 no description 7.6e-34 135-234
IPR020814 Ribosomal protein S6, plastid/chloroplast
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Molecular Function GO:0019843 rRNA binding    
HAMAP MF_00360 Ribosomal_S6 18.921 134-227
no_ID  
Coil coil coiled-coil NA 144-165
Seg seg seg NA 247-269
Wolf-PSORT
Lj0g3v0205889.1	chlo 9, cyto 3, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0205889.1