Miyakogusa Predicted Gene

Lj0g3v0205839.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7M8M3_SOYBN 2043 68.1 75.0 (tr|K7M8M3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G16310.1 1049 56.1 69.9 | Symbols: LDL3 | LSD1-like 3 | chr4:9218636-9224764 FORWARD LENGTH=1628
Medicago Medtr1g023510.6 2011 66.7 74.4 | polyamine oxidase | HC | chr1:7546911-7537822 | 20130731
Soybean Glyma14g40610.1 1840 65.0 71.6  
LJGI gnl|LJGI|BP074264 91.7 81.0 81.0 homologue to UniRef100_A7NT09 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (3%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0205839.1 length: 1489 aa.
IPR002937 Amine oxidase
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01593 Amino_oxidase 6.6e-96 784-1234
IPR007526 SWIRM domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF04433 SWIRM 4.4e-11 520-609
ProfileScan PS50934 SWIRM 15.316 519-619
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
superfamily SSF46689 Homeodomain-like 1e-15 514-625
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 6.7e-13 520-617
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 9.7e-13 772-820
IPR017923 Transcription factor IIS, N-terminal
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006351 transcription, DNA-dependent    
superfamily SSF47676 Conserved 2e-06 1322-1424
no_ID  
FPrintScan PR00419 ADXRDTASE 2.4e-06 775-797
798-811
Gene3D G3DSA:3.90.660.10 no description 5.5e-67 978-1189
HMMPanther PTHR10742 AMINE 0 369-1439
HMMPanther PTHR10742:SF30 AMINE 0 369-1439
Seg seg seg NA 84-91
178-188
430-445
1409-1420
superfamily SSF51905 FAD/NAD(P)-binding 1.5e-39 774-1238
superfamily SSF54373 FAD-linked 1e-29 1072-1184
Wolf-PSORT
Lj0g3v0205839.1	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0205839.1