Miyakogusa Predicted Gene

Lj0g3v0205729.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JVD3_SOYBN 995 75.3 83.5 (tr|I1JVD3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G78230.1 486 52.1 63.7 | Symbols: | Outer arm dynein light chain 1 protein | chr1:29430226-29432516 FORWARD LENGTH=681
Medicago Medtr3g074720.1 947 71.8 80.5 | outer arm dynein light chain 1 | HC | chr3:33762799-33767220 | 20130731
Soybean Glyma04g10940.1 995 75.3 83.5  
LJGI gnl|LJGI|TC72911 420 98.7 98.7 similar to UniRef100_UPI0000660C9E Cluster: Vasopressin V2 receptor (Renal-type arginine vasopressin receptor) (Antidiuretic hormone receptor) (AVPR V2).; n=1; Takifugu rubripes|Rep: Vasopressin V2 receptor (Renal-type arginine vasopressin receptor) (Antidiuretic hormone receptor) (AVPR V2). - Takifugu rubripes, partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0205729.1 length: 665 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS51450 LRR 5.587 447-467
469-490
491-513
514-535
536-557
562-583
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 63 445-467
489-512
534-556
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 4.8e-11 490-531
no_ID  
Gene3D G3DSA:3.80.10.10 no description 2.9e-41 432-606
HMMPanther PTHR10588 FAMILY 1.2e-118 156-614
HMMPanther PTHR10588:SF159SUBFAMILY NOT 1.2e-118 156-614
HMMPfam PF13516 LRR_6 0.33 470-489
536-550
HMMSmart SM00365 Leucine-rich 31 467-488
489-511
512-533
534-555
Seg seg seg NA 634-651
superfamily SSF52058 L 3.9e-32 430-577
Wolf-PSORT
Lj0g3v0205729.1	nucl 7, chlo 4, cyto_nucl 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0205729.1