Miyakogusa Predicted Gene

Lj0g3v0205409.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K748_SOYBN 628 69.0 79.3 (tr|K7K748) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G70650.1 394 61.1 73.6 | Symbols: | Ran BP2/NZF zinc finger-like superfamily protein | chr1:26638158-26640126 FORWARD LENGTH=466
Medicago Medtr1g032260.1 641 69.1 77.4 | zinc finger (Ran-binding) family protein | HC | chr1:11448862-11445087 | 20130731
Soybean Glyma02g09300.1 614 67.7 76.7  
LJGI gnl|LJGI|TC67136 1453 99.6 99.6 weakly similar to UniRef100_A7P3U3 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0205409.1 length: 509 aa.
IPR001876 Zinc finger, RanBP2-type
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1060.10 no description 1.2e-09 251-283
298-328
329-364
HMMPfam PF00641 zf-RanBP 8.8e-06 258-282
302-326
337-359
HMMSmart SM00547 Zinc 1.3e-05 260-284
304-328
337-361
PatternScan PS01358 ZF_RANBP2_1 NA 262-281
306-325
339-358
ProfileScan PS50199 ZF_RANBP2_2 9.642 258-281
302-331
335-364
no_ID  
Coil coil coiled-coil NA 206-227
HMMPanther PTHR23111 ZINC 1.4e-123 50-367
HMMPanther PTHR23111:SF17 OS07G0490600 1.4e-123 50-367
Seg seg seg NA 23-37
41-54
389-404
superfamily SSF90209 Ran 0.00062 292-334
248-290
333-363
Wolf-PSORT
Lj0g3v0205409.1	chlo 5, mito 5, chlo_mito 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0205409.1