Miyakogusa Predicted Gene

Lj0g3v0205299.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5Y8C9_PRUPE 285 73.7 79.4 (tr|M5Y8C9) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000450mg PE=4 SV=1
TAIR_pep AT5G13010.1 272 67.7 78.5 | Symbols: EMB3011 | RNA helicase family protein | chr5:4122747-4128660 FORWARD LENGTH=1255
Medicago Medtr2g098440.1 281 72.2 79.4 | Pre-mRNA-splicing factor ATP-dependent RNA helicase | HC | chr2:42091662-42101447 | 20130731
Soybean Glyma13g41740.1 285 73.2 79.4  
LJGI gnl|LJGI|TC74403 646 100.0 100.0 homologue to UniRef100_A7QBN2 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0205299.2 length: 186 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 1.1e-13 48-135
HMMSmart SM00490 helicase 3.9e-13 34-138
ProfileScan PS51194 HELICASE_CTER 12.600 1-166
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.5e-37 9-182
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.7e-08 9-135
HMMPanther PTHR18934 ATP-DEPENDENT 2.5e-95 1-183
HMMPanther PTHR18934:SF68 SUBFAMILY 2.5e-95 1-183
Seg seg seg NA 39-45
123-137
Wolf-PSORT
Lj0g3v0205299.2	cyto 6, chlo 3, cyto_pero 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0205299.2