Miyakogusa Predicted Gene

Lj0g3v0205299.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M535_SOYBN 465 77.9 84.3 (tr|I1M535) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G13010.1 392 72.2 81.7 | Symbols: EMB3011 | RNA helicase family protein | chr5:4122747-4128660 FORWARD LENGTH=1255
Medicago Medtr2g098440.1 452 80.2 86.3 | Pre-mRNA-splicing factor ATP-dependent RNA helicase | HC | chr2:42091662-42101447 | 20130731
Soybean Glyma13g41740.1 465 77.9 84.3  
LJGI gnl|LJGI|FS330871 1382 99.7 99.7 similar to UniRef100_A7QBN2 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0205299.1 length: 282 aa.
IPR007502 Helicase-associated domain
method AccNumber shortName E-value location
Molecular Function GO:0004386 helicase activity    
HMMPfam PF04408 HA2 8.5e-17 1-66
HMMSmart SM00847 Helicase 1.8e-11 1-67
IPR011709 Domain of unknown function DUF1605
HMMPfam PF07717 OB_NTP_bind 1.6e-22 101-201
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.9e-14 1-111
no_ID  
Coil coil coiled-coil NA 217-260
HMMPanther PTHR18934 ATP-DEPENDENT 6e-104 1-208
Seg seg seg NA 5-16
240-252
Wolf-PSORT
Lj0g3v0205299.1	nucl 6, cyto 5, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0205299.1