Miyakogusa Predicted Gene
- Lj0g3v0204409.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q84RS0_MEDSA |
204 |
75.9 |
78.0 |
(tr|Q84RS0) ZR4 protein (Fragment) OS=Medicago sativa GN=zr4 PE=2 SV=1 |
| TAIR_pep |
AT5G12350.1 |
174 |
66.7 |
72.3 |
| Symbols: | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | chr5:3995789-4000545 FORWARD LENGTH=1075 |
| Medicago |
Medtr5g089900.1 |
197 |
75.2 |
77.3 |
| regulator of chromosome condensation (RCC1) family protein | HC | chr5:39105074-39114126 | 20130731 |
| Soybean |
Glyma14g03830.1 |
204 |
76.6 |
77.3 |
|
| LJGI |
gnl|LJGI|AV422170 |
555 |
98.7 |
98.7 |
homologue to UniRef100_Q84RS0 Cluster: ZR4 protein; n=1; Medicago sativa|Rep: ZR4 protein - Medicago sativa (Alfalfa), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0204409.1 |
length: 141 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Coil |
coil |
coiled-coil |
NA |
98-140 |
| HMMPanther |
PTHR22870 |
REGULATOR |
3.1e-60 |
2-141 |
| HMMPanther |
PTHR22870:SF90 |
REGULATOR |
3.1e-60 |
2-141 |
| Seg |
seg |
seg |
NA |
66-94 |
- Wolf-PSORT
Lj0g3v0204409.1 chlo 6, nucl 4, extr 2, cyto_nucl 2, cysk_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0204409.1 |
|