Miyakogusa Predicted Gene
- Lj0g3v0203629.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L2F4_SOYBN |
207 |
68.2 |
73.4 |
(tr|I1L2F4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G20550.1 |
193 |
64.7 |
72.5 |
| Symbols: DDL | SMAD/FHA domain-containing protein | chr3:7174695-7177600 REVERSE LENGTH=314 |
| Medicago |
Medtr3g049440.1 |
206 |
67.5 |
73.4 |
| smad/FHA domain protein | HC | chr3:18428767-18421128 | 20130731 |
| Soybean |
Glyma09g15300.1 |
207 |
68.2 |
73.4 |
|
| LJGI |
gnl|LJGI|TC73403 |
406 |
100.0 |
100.0 |
weakly similar to UniRef100_A7SDH1 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis (Starlet sea anemone), partial (80%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0203629.1 |
length: 147 aa. |
| IPR000253 |
Forkhead-associated (FHA) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Gene3D |
G3DSA:2.60.200.20 |
no description |
5e-16 |
95-145 |
| HMMPfam |
PF00498 |
FHA |
3.3e-09 |
95-132 |
| IPR008984 |
SMAD/FHA domain |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| superfamily |
SSF49879 |
SMAD/FHA |
2.8e-13 |
41-144 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
3-24 |
| HMMPanther |
PTHR23308 |
NUCLEAR |
9.5e-59 |
2-145 |
| HMMPanther |
PTHR23308:SF15 |
SUBFAMILY |
9.5e-59 |
2-145 |
| Seg |
seg |
seg |
NA |
1-17 |
- Wolf-PSORT
Lj0g3v0203629.1 cyto 5, chlo 2, nucl 2, mito 2, extr 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0203629.1 |
|