Miyakogusa Predicted Gene

Lj0g3v0203509.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M864_SOYBN 793 80.2 86.6 (tr|K7M864) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G02660.1 674 65.0 77.0 | Symbols: emb2768 | Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial | chr3:570221-571756 REVERSE LENGTH=511
Medicago Medtr3g466250.1 862 84.3 89.9 | tyrosyl-tRNA synthetase | HC | chr3:27231447-27233269 | 20130731
Soybean Glyma02g40060.1 744 77.7 83.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0203509.1 length: 502 aa.
IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
PatternScan PS00178 AA_TRNA_LIGASE_I NA 101-111
IPR002305 Aminoacyl-tRNA synthetase, class Ic
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00579 tRNA-synt_1b 2.8e-75 91-401
IPR002307 Tyrosine-tRNA ligase
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004831 tyrosine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006437 tyrosyl-tRNA aminoacylation    
FPrintScan PR01040 TRNASYNTHTYR 5.1e-26 105-127
239-254
260-282
295-307
HMMTigr TIGR00234 tyrS: 3.5e-109 67-500
IPR002942 RNA-binding S4 domain
Molecular Function GO:0003723 RNA binding    
Gene3D G3DSA:3.10.290.10 no description 3.4e-26 397-501
HMMPfam PF01479 S4 7.8e-06 440-482
ProfileScan PS50889 S4 12.317 435-501
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Gene3D G3DSA:3.40.50.620 no description 2e-91 49-311
IPR024088 Tyrosine-tRNA ligase, bacterial-type
Molecular Function GO:0004831 tyrosine-tRNA ligase activity    
HMMPanther PTHR11766 TYROSYL-TRNA 9.9e-186 32-502
IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1
Molecular Function GO:0004831 tyrosine-tRNA ligase activity    
HAMAP MF_02006 Tyr_tRNA_synth_type1 40.097 61-501
no_ID  
Gene3D G3DSA:1.10.240.10 no description 1.1e-34 312-396
HMMPanther PTHR11766:SF0 SUBFAMILY 9.9e-186 32-502
Seg seg seg NA 49-58
superfamily SSF52374 Nucleotidylyl 3.1e-89 60-402
superfamily SSF55174 Alpha-L 3.9e-18 401-502
Wolf-PSORT
Lj0g3v0203509.1	chlo 11, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0203509.1 Not targeted -56.305 -0.061 -6.886 84.32% -49.358