Miyakogusa Predicted Gene

Lj0g3v0203219.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LLW8_SOYBN 1301 86.4 88.2 (tr|K7LLW8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G32640.2 1038 76.2 84.5 | Symbols: | Sec23/Sec24 protein transport family protein | chr4:15742661-15750424 FORWARD LENGTH=1080
Medicago Medtr1g112310.1 1238 83.3 85.9 | protein transporter Sec24-like CEF protein, putative | HC | chr1:50827257-50842682 | 20130731
Soybean Glyma10g42720.1 1303 86.4 88.2  
LJGI gnl|LJGI|GO023599 1427 98.7 98.7 homologue to UniRef100_A7P0Y4 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0203219.1 length: 927 aa.
IPR002035 von Willebrand factor, type A
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.40.50.410 no description 1e-97 474-714
IPR006895 Zinc finger, Sec23/Sec24-type
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006888 ER to Golgi vesicle-mediated transport    
Molecular Function GO:0008270 zinc ion binding    
Cellular Component GO:0030127 COPII vesicle coat    
HMMPfam PF04810 zf-Sec23_Sec24 6.2e-18 396-435
superfamily SSF82919 Zn-finger 1.1e-28 383-471
IPR006896 Sec23/Sec24, trunk domain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006888 ER to Golgi vesicle-mediated transport    
Cellular Component GO:0030127 COPII vesicle coat    
HMMPfam PF04811 Sec23_trunk 5.9e-80 472-712
IPR006900 Sec23/Sec24, helical domain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006888 ER to Golgi vesicle-mediated transport    
Cellular Component GO:0030127 COPII vesicle coat    
HMMPfam PF04815 Sec23_helical 1e-18 815-908
superfamily SSF81811 Helical 2.2e-28 812-915
IPR012990 Sec23/Sec24 beta-sandwich
HMMPfam PF08033 Sec23_BS 5.1e-22 717-801
no_ID  
HMMPanther PTHR13803 SEC24-RELATED 0 21-927
HMMPanther PTHR13803:SF0 SUBFAMILY 0 21-927
Seg seg seg NA 29-68
74-86
91-123
158-184
251-276
586-597
864-882
superfamily SSF53300 vWA-like 1.2e-68 472-716
superfamily SSF81995 beta-sandwich 8.9e-70 209-811
Wolf-PSORT
Lj0g3v0203219.1	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0203219.1