Miyakogusa Predicted Gene

Lj0g3v0203199.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7ICI1_MEDTR 826 58.5 71.0 (tr|G7ICI1) Receptor protein kinase-like protein OS=Medicago truncatula GN=MTR_1g039220 PE=4 SV=1
TAIR_pep AT1G35710.1 546 41.3 57.9 | Symbols: | Protein kinase family protein with leucine-rich repeat domain | chr1:13220940-13224386 FORWARD LENGTH=1120
Medicago Medtr1g040615.1 842 60.3 72.0 | LRR receptor-like kinase family protein | LC | chr1:15030390-15038494 | 20130731
Soybean Glyma18g42730.1 736 52.4 62.6  
LJGI gnl|LJGI|DC600151 888 99.8 99.8 weakly similar to UniRef100_Q0PY41 Cluster: Leucine-rich repeat family protein; n=1; Solanum lycopersicum|Rep: Leucine-rich repeat family protein - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0203199.1 length: 773 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.36 425-444
545-567
617-637
ProfileScan PS51450 LRR 5.556 113-134
137-159
161-183
185-207
233-255
281-303
329-351
353-376
401-423
425-447
521-543
545-568
569-592
593-614
617-639
665-686
641-663
689-710
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 1e+02 111-134
135-159
183-207
231-255
279-303
375-399
423-447
544-567
615-638
663-686
687-710
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 7.7e-09 22-59
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 1.4e-06 233-269
no_ID  
FPrintScan PR00019 LEURICHRPT 3e-05 282-295
663-676
Gene3D G3DSA:3.80.10.10 no description 9.5e-67 24-241
242-480
481-726
HMMPanther PTHR24420 FAMILY 2.3e-168 94-763
HMMPanther PTHR24420:SF68 SUBFAMILY 2.3e-168 94-763
HMMPfam PF13516 LRR_6 0.61 519-534
HMMPfam PF13855 LRR_8 1e-09 88-148
642-700
HMMSmart SM00365 Leucine-rich 7.4e+02 111-137
159-185
231-257
279-305
375-401
423-455
591-623
Seg seg seg NA 373-386
superfamily SSF52047 RNI-like 1.2e-68 68-388
391-701
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 20
122 144
746 768
Wolf-PSORT
Lj0g3v0203199.1	plas 9, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0203199.1