Miyakogusa Predicted Gene
- Lj0g3v0202599.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LFL4_SOYBN |
516 |
84.0 |
92.0 |
(tr|K7LFL4) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT1G62660.1 |
428 |
68.8 |
82.3 |
| Symbols: | Glycosyl hydrolases family 32 protein | chr1:23199949-23203515 FORWARD LENGTH=648 |
| Medicago |
Medtr3g008530.1 |
489 |
79.5 |
89.2 |
| soluble acid invertase FRUCT2 | HC | chr3:1569741-1574987 | 20130731 |
| Soybean |
Glyma09g36580.1 |
514 |
84.0 |
92.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0202599.1 |
length: 293 aa. |
| IPR001362 |
Glycoside hydrolase, family 32 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMSmart |
SM00640 |
Glycosyl |
2e-86 |
7-293 |
| IPR013148 |
Glycosyl hydrolase family 32, N-terminal |
| HMMPfam |
PF00251 |
Glyco_hydro_32N |
6.2e-95 |
7-292 |
| IPR023296 |
Glycosyl hydrolase, five-bladed beta-propellor domain |
| Gene3D |
G3DSA:2.115.10.20 |
no description |
1e-10 |
13-99 |
| superfamily |
SSF75005 |
Arabinanase/levansucrase/invertase |
2.2e-81 |
7-292 |
| no_ID |
|
| HMMPanther |
PTHR31953 |
FAMILY |
2.3e-150 |
6-292 |
| HMMPanther |
PTHR31953:SF0 |
SUBFAMILY |
2.3e-150 |
6-292 |
- Wolf-PSORT
Lj0g3v0202599.1 chlo 6, cyto 5.5, cyto_E.R. 3.5, mito 1, vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0202599.1 |
Not targeted |
-23.137 |
-0.049 |
-3.998 |
17.58% |
-19.090
|