Miyakogusa Predicted Gene
- Lj0g3v0202099.4
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K9S7_SOYBN |
355 |
55.8 |
67.9 |
(tr|I1K9S7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G53840.1 |
91.7 |
28.6 |
46.9 |
| Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr5:21859148-21860672 REVERSE LENGTH=444 |
| Medicago |
Medtr4g050930.1 |
346 |
51.5 |
65.5 |
| F-box/RNI superfamily protein | HC | chr4:36591608-36584820 | 20130731 |
| Soybean |
Glyma06g10300.1 |
355 |
55.8 |
67.9 |
|
| LJGI |
gnl|LJGI|BP071245 |
331 |
98.9 |
98.9 |
similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago truncatula|Rep: Cyclin-like F-box - Medicago truncatula (Barrel medic), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0202099.4 |
length: 373 aa. |
| IPR001810 |
F-box domain, cyclin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00646 |
F-box |
8.7e-07 |
31-70 |
| HMMSmart |
SM00256 |
A |
0.00036 |
35-75 |
| superfamily |
SSF81383 |
F-box |
1.4e-09 |
27-119 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
1e-14 |
27-329 |
| HMMPanther |
PTHR32212 |
FAMILY |
2.7e-25 |
10-309 |
| Seg |
seg |
seg |
NA |
283-292 |
| superfamily |
SSF52047 |
RNI-like |
1.6e-06 |
78-331 |
- Wolf-PSORT
Lj0g3v0202099.4 nucl 7, mito 4.5, cyto_mito 3, chlo 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0202099.4 |
|