Miyakogusa Predicted Gene

Lj0g3v0201389.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SKZ0_LOTJA 318 99.4 99.4 (tr|I3SKZ0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G25630.1 298 91.7 96.2 | Symbols: FIB2, ATFIB2 | fibrillarin 2 | chr4:13074239-13076205 FORWARD LENGTH=320
Medicago Medtr1g114000.1 305 94.9 98.1 | mediator of RNA polymerase II transcription subunit 36a | HC | chr1:51431328-51427705 | 20130731
Soybean Glyma11g36090.1 304 94.3 98.7  
LJGI gnl|LJGI|TC68051 932 100.0 100.0 similar to UniRef100_Q25C91 Cluster: Tobacco fibrillarin homolog; n=1; Nicotiana tabacum|Rep: Tobacco fibrillarin homolog - Nicotiana tabacum (Common tobacco), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0201389.1 length: 204 aa.
IPR000692 Fibrillarin
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006364 rRNA processing    
Biological Process GO:0008033 tRNA processing    
Molecular Function GO:0008168 methyltransferase activity    
FPrintScan PR00052 FIBRILLARIN 3e-62 70-89
98-117
125-146
150-167
175-204
HMMPIR PIRSF006540 Fibrillarin 7.1e-90 1-204
HMMPanther PTHR10335 RRNA 1.2e-134 6-203
HMMPfam PF01269 Fibrillarin 2.3e-77 51-203
IPR020813 Fibrillarin, conserved site
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006364 rRNA processing    
Biological Process GO:0008033 tRNA processing    
Molecular Function GO:0008168 methyltransferase activity    
PatternScan PS00566 FIBRILLARIN NA 150-164
no_ID  
Gene3D G3DSA:3.30.200.20 no description 5.4e-27 46-102
Gene3D G3DSA:3.40.50.150 no description 2e-37 103-203
Seg seg seg NA 6-46
superfamily SSF53335 S-adenosyl-L-methionine-dependent 2.3e-37 49-203
Wolf-PSORT
Lj0g3v0201389.1	cyto 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0201389.1