Miyakogusa Predicted Gene

Lj0g3v0201099.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JBC0_MEDTR 988 89.3 91.9 (tr|G7JBC0) Protein transport protein Sec23 OS=Medicago truncatula GN=MTR_3g084740 PE=4 SV=1
TAIR_pep AT1G05520.1 891 80.3 87.2 | Symbols: | Sec23/Sec24 protein transport family protein | chr1:1631126-1635703 REVERSE LENGTH=783
Medicago Medtr3g084740.1 988 89.3 91.9 | protein transporter Sec23-like protein | HC | chr3:38270252-38263566 | 20130731
Soybean Glyma11g36760.1 986 89.7 91.9  
LJGI gnl|LJGI|TC69196 1338 100.0 100.0 similar to UniRef100_A7QQS7 Cluster: Chromosome undetermined scaffold_144, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_144, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0201099.1 length: 533 aa.
IPR002035 von Willebrand factor, type A
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.40.50.410 no description 1e-67 2-165
IPR006896 Sec23/Sec24, trunk domain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006888 ER to Golgi vesicle-mediated transport    
Cellular Component GO:0030127 COPII vesicle coat    
HMMPfam PF04811 Sec23_trunk 6.5e-48 1-160
IPR006900 Sec23/Sec24, helical domain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006888 ER to Golgi vesicle-mediated transport    
Cellular Component GO:0030127 COPII vesicle coat    
HMMPfam PF04815 Sec23_helical 1.2e-30 290-390
superfamily SSF81811 Helical 2.2e-48 289-391
IPR007123 Gelsolin domain
HMMPfam PF00626 Gelsolin 4.4e-14 401-489
IPR012990 Sec23/Sec24 beta-sandwich
HMMPfam PF08033 Sec23_BS 2.6e-30 171-274
no_ID  
Gene3D G3DSA:2.60.40.1670 no description 1.4e-34 168-275
Gene3D G3DSA:3.40.20.10 no description 1.2e-56 391-516
HMMPanther PTHR11141 PROTEIN 0 1-533
Seg seg seg NA 35-47
266-281
superfamily SSF53300 vWA-like 2.5e-55 1-162
superfamily SSF81995 beta-sandwich 9.1e-39 178-288
superfamily SSF82754 C-terminal, 1.5e-53 392-532
Wolf-PSORT
Lj0g3v0201099.1	cyto 10, chlo 2, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0201099.1