Miyakogusa Predicted Gene

Lj0g3v0200859.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TIZ0_SOYBN 104 65.5 66.7 (tr|C6TIZ0) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT3G22120.1 82.0 55.8 58.1 | Symbols: CWLP | cell wall-plasma membrane linker protein | chr3:7795283-7796287 REVERSE LENGTH=334
Medicago Medtr3g082100.1 95.1 57.3 61.8 | Lipid transfer protein | HC | chr3:37046744-37048858 | 20130731
Soybean Glyma20g06290.1 101 65.1 66.3  
LJGI gnl|LJGI|TC69393 1407 97.7 97.7 similar to UniRef100_Q40336 Cluster: Proline-rich cell wall protein; n=1; Medicago sativa|Rep: Proline-rich cell wall protein - Medicago sativa (Alfalfa), partial (87%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0200859.1 length: 391 aa.
IPR016140 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
method AccNumber shortName E-value location
HMMPfam PF00234 Tryp_alpha_amyl 1.4e-05 308-388
superfamily SSF47699 Bifunctional 3.8e-22 309-391
no_ID  
FPrintScan PR01217 PRICHEXTENSN 7e-12 34-55
58-74
75-92
96-121
Gene3D G3DSA:1.10.110.10 no description 1e-28 305-389
HMMPanther PTHR31731 FAMILY 4.1e-35 281-390
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-26
Seg seg seg NA 8-24
25-83
87-302
320-331
361-376
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 28
Wolf-PSORT
Lj0g3v0200859.1	extr 7, cyto 3, chlo 2, vacu 1, cysk 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0200859.1