Miyakogusa Predicted Gene

Lj0g3v0200139.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JFM9_MEDTR 770 69.5 80.8 (tr|G7JFM9) F-box/LRR-repeat protein OS=Medicago truncatula GN=MTR_4g009030 PE=4 SV=1
TAIR_pep AT1G80630.1 301 39.2 55.2 | Symbols: | RNI-like superfamily protein | chr1:30308879-30310615 REVERSE LENGTH=578
Medicago Medtr4g009030.1 806 72.0 83.9 | F-box/LRR protein | HC | chr4:1743950-1742277 | 20130731
Soybean Glyma08g23130.1 752 73.4 82.7  
LJGI gnl|LJGI|FS322002 58.0 89.8 89.8 weakly similar to UniRef100_A9U3I4 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0200139.1 length: 559 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 0.00074 5-41
ProfileScan PS50181 FBOX 8.517 1-51
IPR006553 Leucine-rich repeat, cysteine-containing subtype
HMMSmart SM00367 Leucine-rich 57 88-113
168-193
256-280
310-335
336-361
418-443
466-490
491-516
517-545
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1.3e-33 4-228
404-546
HMMPanther PTHR23125 F-BOX/LEUCINE 5.8e-60 4-528
HMMPanther PTHR23125:SF58 SUBFAMILY 5.8e-60 4-528
HMMPfam PF13516 LRR_6 0.65 169-192
256-279
467-488
Seg seg seg NA 85-99
superfamily SSF52047 RNI-like 4.9e-13 289-549
4-279
Wolf-PSORT
Lj0g3v0200139.1	cyto 7, nucl 5, chlo 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0200139.1