Miyakogusa Predicted Gene

Lj0g3v0199339.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LUE3_SOYBN 849 62.1 72.5 (tr|K7LUE3) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT2G34930.1 290 33.2 48.9 | Symbols: | disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905
Medicago Medtr6g037750.1 827 61.5 70.0 | receptor-like protein | LC | chr6:13470318-13474508 | 20130731
Soybean Glyma12g14530.1 850 62.1 72.5  
LJGI gnl|LJGI|TC63614 56.0 82.0 82.0 weakly similar to UniRef100_A7QGC3 Cluster: Chromosome undetermined scaffold_91, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_91, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0199339.1 length: 717 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.67 25-43
520-540
ProfileScan PS51450 LRR 6.172 25-47
48-70
72-93
96-118
125-146
148-170
252-274
323-342
347-369
371-393
395-417
420-443
444-465
519-541
543-565
567-589
591-613
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 26 46-76
369-393
418-442
517-541
565-589
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 2.5e-08 372-407
no_ID  
FPrintScan PR00019 LEURICHRPT 2.8e-05 520-533
565-578
Gene3D G3DSA:3.80.10.10 no description 1.3e-26 3-132
133-258
259-469
516-632
HMMPanther PTHR24420 FAMILY 2.9e-116 30-632
HMMPfam PF13855 LRR_8 1.6e-06 47-107
544-602
Seg seg seg NA 143-160
666-681
superfamily SSF52058 L 7.6e-43 294-635
25-292
Putative transmembrane regions
  From To
TM segments
SOSUI		 658 680
689 710
Wolf-PSORT
Lj0g3v0199339.1	nucl 5, golg 5, chlo 1, cyto 1, plas 1, vacu 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0199339.1